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PSM map: color by charge or retention time, show or hide each charge state - #166

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claude/project-thread-r5cyia
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Requested by Tom · project thread

What it does

The PSM overview maps (Database search and Filtered PSMs) get a toolbar:

  • Color by: color the PSMs by their score (as before), by charge or by retention time.
  • Layers: show or hide each charge state.
  • Colorbar: edit the color scale.

These are render-time options of the openms-insight Heatmap, so existing caches keep working and no run has to be repeated. The requirement moves to openms-insight>=0.7.5, which has them.

Screenshots

Before (no Layers button):

before

After:

after

Color by menu:

color menu

Colored by charge:

by charge

Layers by charge state:

layers

Tests

  • python -m pytest test_gui.py tests/: 1301 passed, 6 skipped.
  • pylint (errors only) on the changed files: clean.

Generated by Claude Code

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coderabbitai Bot commented Nov 15, 2026

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